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Title	en DB-AT: a 2015 update to the Full-parasites database brings a multitude of new transcriptomic data for apicomplexan parasites
Creator	en Jakalski, Marcin en Wakaguri, Hiroyuki en Kischka, Tabea G. en Nishikawa, Yoshifumi NRID 1000090431395 en Kawazu, Shin-ichiro en Matsubayashi, Makoto NRID 1000000321076 en Kawahara, Fumiya en Tsuji, Naotoshi NRID 1000070355171 en Cao, Shinuo en Sunaga, Fujiko en Xuan, Xuenan NRID 1000010292096 en Okubo, Kazuhiro en Igarashi, Ikuo NRID 1000080159582 en Tuda, Josef en Mongan, Arthur E. en Eshita, Yuki NRID 1000010082223 en Maeda, Ryuichiro en Makalowski, Wojciech en Suzuki, Yutaka NRID 1000040323646 en Yamagishi, Junya NRID 1000080535328
Accessrights	open access
Rights	en (C)The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ en Creative Commons Attribution 4.0 International
Subject	NDC 491
Description	Abstract en The previous release of our Full-parasites database (http://fullmal.hgc.jp/) brought enhanced functionality, an expanded full-length cDNA content, and new RNA-Seq datasets from several important apicomplexan parasites. The 2015 update witnesses the major shift in the databases content with focus on diverse transcriptomes of the apicomplexan parasites. The content of the database was substantially enriched with transcriptome information for new apicomplexan parasites. The latest version covers a total of 17 species, with addition of our newly generated RNA-Seq data of a total of 909 150 388 tags. Moreover, we have generated and included two novel and unique datasets, which represent diverse nature of transcriptomes in individual parasites in vivo and in vitro. One is the data collected from 116 Indonesian patients infected with Plasmodium falciparum. The other is a series of transcriptome data collected from a total of 38 single cells of P. falciparum cultured in vitro. We believe that with the recent advances our database becomes an even better resource and a unique platform in the analysis of apicomplexan parasites and their interaction with their hosts. To adequately reflect the recent modifications and the current content we have changed the database name to DB-AT-DataBase of Apicomplexa Transcriptomes. Other http://nar.oxfordjournals.org/content/43/D1/D631
Publisher	en Oxford University Press
Date	Issued2014-11-10
Language	eng
Resource Type	journal article
Version Type	VoR
Identifier	HDL http://hdl.handle.net/2115/58557
Relation	isIdenticalTo DOI https://doi.org/10.1093/nar/gku1240
Journal	PISSN 0305-1048 EISSN 1362-4962 NCID AA00760269 en Nucleic Acids Research Volume Number43 Issue NumberD1 Page StartD631 Page EndD636
File	fulltext Nucl. Acids Res._HUSCAP_D631-6.pdf 2.1 MB (application/pdf) Issued2014-11-10 fulltext Supplement Data.pdf 232.05 KB (application/pdf) Issued2014-11-10
Oaidate	2023-07-26